Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ39783.1 | SFQ39820.1 | SAMN05421670_1940 | SAMN05421670_1942 | Uncharacterized membrane protein YhhN. | Putative multidrug resistance efflux transporter. | 0.630 |
SFQ39783.1 | pepT | SAMN05421670_1940 | SAMN05421670_1941 | Uncharacterized membrane protein YhhN. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.664 |
SFQ39820.1 | SFQ39783.1 | SAMN05421670_1942 | SAMN05421670_1940 | Putative multidrug resistance efflux transporter. | Uncharacterized membrane protein YhhN. | 0.630 |
SFQ39820.1 | SFQ54067.1 | SAMN05421670_1942 | SAMN05421670_2620 | Putative multidrug resistance efflux transporter. | Protein of unknown function. | 0.517 |
SFQ39820.1 | SFQ55435.1 | SAMN05421670_1942 | SAMN05421670_2659 | Putative multidrug resistance efflux transporter. | Protein of unknown function. | 0.415 |
SFQ39820.1 | pepT | SAMN05421670_1942 | SAMN05421670_1941 | Putative multidrug resistance efflux transporter. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.755 |
SFQ54067.1 | SFQ39820.1 | SAMN05421670_2620 | SAMN05421670_1942 | Protein of unknown function. | Putative multidrug resistance efflux transporter. | 0.517 |
SFQ55435.1 | SFQ39820.1 | SAMN05421670_2659 | SAMN05421670_1942 | Protein of unknown function. | Putative multidrug resistance efflux transporter. | 0.415 |
pepT | SFQ39783.1 | SAMN05421670_1941 | SAMN05421670_1940 | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Uncharacterized membrane protein YhhN. | 0.664 |
pepT | SFQ39820.1 | SAMN05421670_1941 | SAMN05421670_1942 | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Putative multidrug resistance efflux transporter. | 0.755 |