STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ45616.1Methionine-gamma-lyase. (395 aa)    
Predicted Functional Partners:
SFQ73256.1
Homocysteine S-methyltransferase.
  
 0.970
SFQ73264.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.903
SFQ60884.1
O-acetylserine dependent cystathionine beta-synthase.
 
 0.788
SFQ78362.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.760
SFQ32757.1
Methionine synthase II (cobalamin-independent).
  
 
 0.723
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.717
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
 
 0.705
SFQ16164.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.692
SFQ12442.1
CBS domain-containing protein.
  
 
 0.646
SFQ65843.1
Serine O-acetyltransferase.
  
 
 0.642
Your Current Organism:
Psychrobacillus psychrotolerans
NCBI taxonomy Id: 126156
Other names: Bacillus psychrotolerans, Bacillus psychrotolerans Abd El-Rahman et al. 2002, CIP 107792, DSM 11706, NCIMB 13838, P. psychrotolerans, Psychrobacillus psychrotolerans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 3H1
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