STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ54067.1Protein of unknown function. (169 aa)    
Predicted Functional Partners:
SFQ23425.1
Spore coat protein Z.
  
    0.612
SFQ69486.1
Oligoribonuclease NrnB or cAMP/cGMP phosphodiesterase, DHH superfamily.
  
     0.548
SFQ72545.1
YugN-like family protein.
  
     0.539
SFQ46088.1
YtpI-like protein.
  
     0.527
SFQ39820.1
Putative multidrug resistance efflux transporter.
  
     0.517
SFQ08435.1
Spore coat protein CotF.
 
    0.502
SFQ54081.1
EDD domain protein, DegV family.
       0.499
SFQ23268.1
Stage VI sporulation protein F.
  
    0.454
SFQ74678.1
Stage III sporulation protein AH.
  
     0.451
SFQ62951.1
Sporulation protein YunB.
  
    0.442
Your Current Organism:
Psychrobacillus psychrotolerans
NCBI taxonomy Id: 126156
Other names: Bacillus psychrotolerans, Bacillus psychrotolerans Abd El-Rahman et al. 2002, CIP 107792, DSM 11706, NCIMB 13838, P. psychrotolerans, Psychrobacillus psychrotolerans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 3H1
Server load: low (26%) [HD]