STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ72422.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (316 aa)    
Predicted Functional Partners:
SFQ52424.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 0.977
SFQ57280.1
HDIG domain-containing protein.
 
  0.976
SFQ32463.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 0.944
SFQ51726.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.870
SFQ66581.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
  0.842
SFQ09432.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
0.838
SFQ38738.1
Diguanylate cyclase/phosphodiesterase.
 
  0.818
SFQ22924.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.817
SFQ67624.1
HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant).
 
  0.779
SFQ71819.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.756
Your Current Organism:
Psychrobacillus psychrotolerans
NCBI taxonomy Id: 126156
Other names: Bacillus psychrotolerans, Bacillus psychrotolerans Abd El-Rahman et al. 2002, CIP 107792, DSM 11706, NCIMB 13838, P. psychrotolerans, Psychrobacillus psychrotolerans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 3H1
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