STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM22339.1Glyoxylase, beta-lactamase superfamily II. (285 aa)    
Predicted Functional Partners:
SFN12443.1
Glyoxylase, beta-lactamase superfamily II.
  
  0.652
SFM87270.1
Glyoxalase family protein.
   
 
  0.640
rplJ
Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
   
 
  0.630
SFM98580.1
EcsC protein family protein.
  
    0.618
SFM66042.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
 
   0.591
SFN20888.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.581
SFM22323.1
DNA polymerase-3 subunit epsilon.
     
 0.532
SFM22362.1
Uncharacterized conserved protein, Ntn-hydrolase superfamily.
       0.526
SFN09162.1
Uncharacterized membrane protein.
  
     0.510
SFM48540.1
Rhodanese-related sulfurtransferase.
  
  0.487
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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