STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM19908.1Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (350 aa)    
Predicted Functional Partners:
SFM59894.1
UDP-glucose 4-epimerase.
 
    
 0.890
SFM19888.1
Predicted dehydrogenase.
 
 
 0.855
SFM98669.1
PTS system, N-acetylglucosamine-specific IIC component.
    
 0.839
SFM19697.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
  
 0.805
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
   
 0.789
SFM48849.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.778
SFM60175.1
Beta-glucosidase.
 
 
 0.760
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
   
 0.744
SFM23932.1
Protein of unknown function.
  
 
 0.733
SFM73733.1
Glucokinase.
 
  
 0.733
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.