STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM27835.1TRAP-type C4-dicarboxylate transport system, small permease component. (177 aa)    
Predicted Functional Partners:
SFM27850.1
TRAP transporter, DctM subunit.
 
 0.993
SFM27821.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
 0.985
SFM28340.1
C4-dicarboxylate transporter, DctM subunit.
 
 0.970
SFM28614.1
TRAP transporter, DctM subunit.
 
 0.970
SFM28577.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
 0.945
SFM28308.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
 0.944
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
     0.692
SFM27806.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.688
SFM27863.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
       0.530
SFM27875.1
2-deoxy-D-gluconate 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.525
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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