STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM38110.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SFM34935.1
Cytochrome c551.
 
 
 0.955
SFN24113.1
Alcohol dehydrogenase (cytochrome c).
   
 0.945
SFM27373.1
Hypothetical protein.
   
 0.901
SFM38088.1
Uncharacterized protein YlaI.
 
     0.823
SFM59135.1
NADH dehydrogenase.
  
  
  0.801
SFN12443.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.777
SFN19135.1
MarR family transcriptional regulator, protease production regulatory protein HPr.
  
  
  0.775
SFM65913.1
Protein of unknown function.
  
     0.773
SFM59581.1
Thiol-disulfide isomerase or thioredoxin.
  
    0.768
SFN26689.1
Protein of unknown function.
  
     0.755
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.