Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM42711.1 | SFM51749.1 | SAMN05421832_102449 | SAMN05421832_103188 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADPH/NADH) large chain. | 0.888 |
SFM42711.1 | SFM58434.1 | SAMN05421832_102449 | SAMN05421832_1047 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.824 |
SFM42711.1 | SFM59694.1 | SAMN05421832_102449 | SAMN05421832_10474 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 3-hydroxyacyl-CoA dehydrogenase. | 0.863 |
SFM42711.1 | SFM98669.1 | SAMN05421832_102449 | SAMN05421832_110140 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | PTS system, N-acetylglucosamine-specific IIC component. | 0.435 |
SFM42711.1 | SFN01255.1 | SAMN05421832_102449 | SAMN05421832_11189 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.883 |
SFM42711.1 | SFN20263.1 | SAMN05421832_102449 | SAMN05421832_12028 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Proline dehydrogenase. | 0.412 |
SFM50265.1 | SFM58434.1 | SAMN05421832_103123 | SAMN05421832_1047 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.810 |
SFM51749.1 | SFM42711.1 | SAMN05421832_103188 | SAMN05421832_102449 | Glutamate synthase (NADPH/NADH) large chain. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.888 |
SFM51749.1 | SFM58434.1 | SAMN05421832_103188 | SAMN05421832_1047 | Glutamate synthase (NADPH/NADH) large chain. | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.865 |
SFM51749.1 | SFM59694.1 | SAMN05421832_103188 | SAMN05421832_10474 | Glutamate synthase (NADPH/NADH) large chain. | 3-hydroxyacyl-CoA dehydrogenase. | 0.467 |
SFM51749.1 | SFM87679.1 | SAMN05421832_103188 | SAMN05421832_10879 | Glutamate synthase (NADPH/NADH) large chain. | Glycine/D-amino acid oxidase. | 0.893 |
SFM51749.1 | SFM98669.1 | SAMN05421832_103188 | SAMN05421832_110140 | Glutamate synthase (NADPH/NADH) large chain. | PTS system, N-acetylglucosamine-specific IIC component. | 0.405 |
SFM51749.1 | SFN01255.1 | SAMN05421832_103188 | SAMN05421832_11189 | Glutamate synthase (NADPH/NADH) large chain. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.579 |
SFM51749.1 | SFN20263.1 | SAMN05421832_103188 | SAMN05421832_12028 | Glutamate synthase (NADPH/NADH) large chain. | Proline dehydrogenase. | 0.791 |
SFM51749.1 | rocD | SAMN05421832_103188 | SAMN05421832_1046 | Glutamate synthase (NADPH/NADH) large chain. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.556 |
SFM58434.1 | SFM42711.1 | SAMN05421832_1047 | SAMN05421832_102449 | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.824 |
SFM58434.1 | SFM50265.1 | SAMN05421832_1047 | SAMN05421832_103123 | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Menaquinol-cytochrome c reductase iron-sulfur subunit. | 0.810 |
SFM58434.1 | SFM51749.1 | SAMN05421832_1047 | SAMN05421832_103188 | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.865 |
SFM58434.1 | SFM59694.1 | SAMN05421832_1047 | SAMN05421832_10474 | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.745 |
SFM58434.1 | SFM87679.1 | SAMN05421832_1047 | SAMN05421832_10879 | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glycine/D-amino acid oxidase. | 0.848 |
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