STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM67370.1Osmoprotectant transport system substrate-binding protein/osmoprotectant transport system permease protein. (297 aa)    
Predicted Functional Partners:
SFM67392.1
Osmoprotectant transport system permease protein.
 
 0.999
SFM67417.1
Osmoprotectant transport system ATP-binding protein.
 0.999
SFM72955.1
Glycine betaine/proline transport system permease protein.
 
 
 0.990
SFM73975.1
Glycine betaine/proline transport system permease protein.
 
 
 0.990
SFM93087.1
Peptide/nickel transport system permease protein.
  
  
  0.969
SFM72934.1
Glycine betaine/proline transport system substrate-binding protein.
   
 
 0.927
SFM73996.1
Glycine betaine/proline transport system substrate-binding protein.
   
 
 0.926
SFM73087.1
Phosphonate transport system substrate-binding protein.
    
  0.921
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
   
  0.920
SFM37352.1
Spermidine/putrescine transport system substrate-binding protein.
   
 
 0.919
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.