STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM68471.1Conserved hypothetical protein EF_0831/AHA_3912. (116 aa)    
Predicted Functional Partners:
SFM68495.1
Conserved hypothetical protein EF_0830/AHA_3911.
  
    0.805
SFM68425.1
Conserved hypothetical protein EF_0833/AHA_3914.
       0.772
SFM68451.1
Conserved hypothetical protein EF_0832/AHA_3913.
       0.772
SFM68401.1
L-seryl-tRNA(Ser) seleniumtransferase/D-glucosaminate-6-phosphate ammonia-lyase.
  
    0.769
SFM68517.1
PRD domain protein EF_0829/AHA_3910.
       0.768
SFM68538.1
Dihydroorotase.
       0.768
SFM68373.1
2-dehydro-3-deoxy-phosphogluconate aldolase.
       0.767
SFM68557.1
Transcriptional antiterminator.
       0.746
SFM68350.1
Acetyltransferase (GNAT) family protein.
       0.403
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.