STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM70153.1Protein of unknown function. (348 aa)    
Predicted Functional Partners:
SFM27761.1
Protein of unknown function.
  
 0.877
SFN09378.1
Protein of unknown function.
  
 0.877
SFM22381.1
Hypothetical protein.
    
  0.814
SFM66314.1
Chemotaxis protein MotB.
    
  0.814
SFM23932.1
Protein of unknown function.
  
  
 0.812
SFM70170.1
Adenine deaminase.
       0.781
SFM70134.1
Trp operon repressor family.
 
    0.762
SFM27634.1
D-glucuronyl C5-epimerase C-terminus.
    
   0.715
SFM20971.1
Bacillopeptidase F.
 
 0.710
SFM29323.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
   0.634
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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