STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM74793.1Predicted membrane protein. (233 aa)    
Predicted Functional Partners:
SFM74815.1
Sensor histidine kinase; Two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS/two-component system, NarL family, sensor histidine kinase LiaS.
 
  
 0.971
SFM74768.1
Phage shock protein A.
 
  
 0.950
SFM74841.1
Two-component system, NarL family, response regulator LiaR.
 
  
 0.921
SFM74742.1
Lia operon protein LiaI.
 
    0.875
SFM62535.1
DUF4097 and DUF4098 domain-containing protein YvlB.
 
  
 0.852
SFM89364.1
Protein of unknown function.
  
  
 0.831
SFN17620.1
Rod shape-determining protein MreD.
  
     0.759
SFN00463.1
Uncharacterized membrane protein, required for colicin V production.
  
     0.723
SFM53606.1
YpjP-like protein.
  
     0.705
SFN07176.1
Penicillin-binding protein.
  
    0.699
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.