STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM74902.1DinB superfamily protein. (153 aa)    
Predicted Functional Partners:
SFM74883.1
Adenylate kinase.
       0.773
SFM20633.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
     0.657
SFM66666.1
Lysophospholipase L1.
  
     0.528
SFM54460.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.512
SFM88597.1
Putative drug exporter of the RND superfamily.
  
     0.499
SFM51868.1
Spore coat protein CotF.
  
     0.497
SFM74926.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
 
     0.493
SFM88634.1
Hypothetical protein.
  
     0.475
SFM77107.1
NitT/TauT family transport system substrate-binding protein.
  
     0.472
SFM49720.1
Spore germination protein.
  
     0.454
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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