STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM73829.1Protein of unknown function. (112 aa)    
Predicted Functional Partners:
SFM73850.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.823
SFM73870.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.802
SFM73891.1
Sporulation-control protein.
 
     0.491
SFM43620.1
Protein of unknown function.
  
     0.484
SFN18859.1
Catechol 2,3-dioxygenase.
  
     0.472
SFM73783.1
Hypothetical protein.
       0.448
SFM73807.1
Hypothetical protein.
       0.448
SFN29853.1
Hypothetical protein.
  
     0.433
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.