STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM72710.1PTS system, ascorbate-specific IIC component. (420 aa)    
Predicted Functional Partners:
SFM72733.1
PTS system, ascorbate-specific IIB component.
 
 
 0.984
SFM72753.1
Transcriptional antiterminator.
 
 
 0.980
SFM28710.1
PTS system, ascorbate-specific IIA component.
 
 
 0.951
SFM28729.1
PTS system, ascorbate-specific IIB component.
 
 
 0.933
SFM22034.1
Mannitol operon transcriptional antiterminator.
 
 
 0.839
SFM98669.1
PTS system, N-acetylglucosamine-specific IIC component.
   
 
 0.816
SFM29253.1
PTS system, fructose-specific IIC component.
  
 
 0.752
SFM68557.1
Transcriptional antiterminator.
 
  
 0.701
rpmE
Large subunit ribosomal protein L31; Binds the 23S rRNA.
   
    0.615
SFM43023.1
Riboflavin synthase.
   
    0.615
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.