STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM81507.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily. (319 aa)    
Predicted Functional Partners:
SFM81635.1
Dipeptide transport system permease protein.
 
  0.996
SFM35761.1
Oligopeptide transport system permease protein.
 
 
  0.994
SFM65699.1
Peptide/nickel transport system permease protein.
 
 
  0.994
SFM92606.1
Nickel transport system permease protein.
 
 
  0.994
SFM19421.1
Peptide/nickel transport system permease protein.
 
 
  0.988
SFM93067.1
Peptide/nickel transport system permease protein.
 
 
 0.988
SFM35645.1
Peptide/nickel transport system permease protein.
 
 
  0.984
SFM67737.1
Peptide/nickel transport system permease protein.
 
 
 0.976
SFM93087.1
Peptide/nickel transport system permease protein.
  
 
 0.972
SFM81658.1
Dipeptide transport system permease protein.
 
  0.971
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.