STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM90229.1Acyl-CoA dehydrogenase. (391 aa)    
Predicted Functional Partners:
SFN00321.1
Electron transfer flavoprotein alpha subunit.
 
 0.958
SFM59694.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.950
SFN00340.1
Electron transfer flavoprotein beta subunit.
 
 0.948
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
   
 0.874
mqo
Malate dehydrogenase (quinone).
   
 
 0.825
SFM42711.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.799
SFM90252.1
L-cystine transport system substrate-binding protein.
  
    0.797
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.774
SFM93790.1
methylmalonyl-CoA mutase.
  
 
 0.751
SFN15085.1
Enoyl-CoA hydratase/carnithine racemase.
  
  0.725
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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