STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM86258.1SprT-like protein; Belongs to the SprT family. (156 aa)    
Predicted Functional Partners:
SFM38650.1
PDZ domain-containing protein.
 
     0.709
SFM86276.1
Uncharacterized protein.
  
  
 0.684
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.648
SFM86495.1
CopG family transcriptional regulator / antitoxin EndoAI.
 
     0.632
SFM50199.1
Tetratricopeptide repeat-containing protein.
  
     0.626
SFM51909.1
Uncharacterized SPBc2 prophage-derived protein YoqJ; Belongs to the UPF0398 family.
  
     0.603
SFM50850.1
DNA replication protein.
 
     0.598
SFM53758.1
Lysophospholipase L1.
  
     0.592
SFN19067.1
ABC-2 type transport system permease protein.
  
     0.570
SFM43518.1
Lipoteichoic acid synthase; Belongs to the LTA synthase family.
  
     0.520
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.