STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM93282.1Uncharacterized membrane protein YesL. (234 aa)    
Predicted Functional Partners:
SFM93300.1
Raffinose/stachyose/melibiose transport system permease protein.
 
    0.748
SFM93328.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
     0.725
SFM59363.1
Protein of unknown function.
  
     0.621
SFM98327.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.578
SFM93265.1
LacI family transcriptional regulator/LacI family transcriptional regulator, purine nucleotide synthesis repressor.
       0.572
SFN11729.1
Adenosylhomocysteine nucleosidase.
  
     0.554
SFM93317.1
Raffinose/stachyose/melibiose transport system permease protein.
 
    0.536
SFM93240.1
Beta-phosphoglucomutase.
       0.473
SFM93225.1
Alpha,alpha-trehalose phosphorylase.
       0.463
SFM92117.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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