Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM69099.1 | SFM94415.1 | SAMN05421832_105179 | SAMN05421832_109159 | Geranylgeranyl pyrophosphate synthase. | DNA-binding transcriptional regulator, MarR family. | 0.442 |
SFM74742.1 | SFM94415.1 | SAMN05421832_10699 | SAMN05421832_109159 | Lia operon protein LiaI. | DNA-binding transcriptional regulator, MarR family. | 0.417 |
SFM94350.1 | SFM94373.1 | SAMN05421832_109156 | SAMN05421832_109157 | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Hypothetical protein. | 0.777 |
SFM94350.1 | SFM94397.1 | SAMN05421832_109156 | SAMN05421832_109158 | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Pyridine nucleotide-disulphide oxidoreductase. | 0.754 |
SFM94350.1 | SFM94415.1 | SAMN05421832_109156 | SAMN05421832_109159 | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | DNA-binding transcriptional regulator, MarR family. | 0.619 |
SFM94350.1 | SFM94431.1 | SAMN05421832_109156 | SAMN05421832_109160 | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Phosphinothricin acetyltransferase. | 0.450 |
SFM94350.1 | arsC | SAMN05421832_109156 | SAMN05421832_109155 | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. | 0.929 |
SFM94373.1 | SFM94350.1 | SAMN05421832_109157 | SAMN05421832_109156 | Hypothetical protein. | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | 0.777 |
SFM94373.1 | SFM94397.1 | SAMN05421832_109157 | SAMN05421832_109158 | Hypothetical protein. | Pyridine nucleotide-disulphide oxidoreductase. | 0.759 |
SFM94373.1 | SFM94415.1 | SAMN05421832_109157 | SAMN05421832_109159 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.599 |
SFM94373.1 | SFM94431.1 | SAMN05421832_109157 | SAMN05421832_109160 | Hypothetical protein. | Phosphinothricin acetyltransferase. | 0.446 |
SFM94373.1 | arsC | SAMN05421832_109157 | SAMN05421832_109155 | Hypothetical protein. | Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. | 0.773 |
SFM94397.1 | SFM94350.1 | SAMN05421832_109158 | SAMN05421832_109156 | Pyridine nucleotide-disulphide oxidoreductase. | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | 0.754 |
SFM94397.1 | SFM94373.1 | SAMN05421832_109158 | SAMN05421832_109157 | Pyridine nucleotide-disulphide oxidoreductase. | Hypothetical protein. | 0.759 |
SFM94397.1 | SFM94415.1 | SAMN05421832_109158 | SAMN05421832_109159 | Pyridine nucleotide-disulphide oxidoreductase. | DNA-binding transcriptional regulator, MarR family. | 0.662 |
SFM94397.1 | SFM94431.1 | SAMN05421832_109158 | SAMN05421832_109160 | Pyridine nucleotide-disulphide oxidoreductase. | Phosphinothricin acetyltransferase. | 0.572 |
SFM94397.1 | arsC | SAMN05421832_109158 | SAMN05421832_109155 | Pyridine nucleotide-disulphide oxidoreductase. | Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. | 0.756 |
SFM94415.1 | SFM69099.1 | SAMN05421832_109159 | SAMN05421832_105179 | DNA-binding transcriptional regulator, MarR family. | Geranylgeranyl pyrophosphate synthase. | 0.442 |
SFM94415.1 | SFM74742.1 | SAMN05421832_109159 | SAMN05421832_10699 | DNA-binding transcriptional regulator, MarR family. | Lia operon protein LiaI. | 0.417 |
SFM94415.1 | SFM94350.1 | SAMN05421832_109159 | SAMN05421832_109156 | DNA-binding transcriptional regulator, MarR family. | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | 0.619 |
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