STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM94479.1Protein of unknown function. (203 aa)    
Predicted Functional Partners:
SFM94457.1
DoxX-like family protein.
 
    0.960
SFM94500.1
YndJ-like protein.
 
    0.960
SFM94431.1
Phosphinothricin acetyltransferase.
       0.564
SFM98901.1
Uncharacterized membrane protein YoaT, DUF817 family.
  
     0.491
SFM80634.1
Bacitracin transport system permease protein.
  
     0.422
SFM94415.1
DNA-binding transcriptional regulator, MarR family.
       0.415
SFM81678.1
D-amino peptidase.
  
     0.407
SFM96088.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
     0.400
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.