STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM97402.13-oxoacid CoA-transferase subunit A/3-oxoadipate CoA-transferase, alpha subunit. (228 aa)    
Predicted Functional Partners:
SFM97380.1
3-oxoacid CoA-transferase.
 0.999
SFN06221.1
3-oxoacid CoA-transferase subunit B.
 0.999
SFM97363.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.872
SFM97425.1
Carboxymuconolactone decarboxylase family protein.
  
 
 0.871
SFM59694.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.818
SFM97444.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 
 0.649
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.614
SFN00321.1
Electron transfer flavoprotein alpha subunit.
    
 0.603
SFM25048.1
Phosphate acetyltransferase.
     
 0.594
SFN00230.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
   
 
  0.583
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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