STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM97462.1NAD(P)H-dependent FMN reductase. (180 aa)    
Predicted Functional Partners:
SFM97478.1
Hypothetical protein.
       0.701
SFM90204.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.665
SFM77107.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.611
SFM42167.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.532
SFM82298.1
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
     
 0.504
SFM43023.1
Riboflavin synthase.
   
 
  0.495
SFM43337.1
Luciferase family oxidoreductase, group 1.
  
  0.487
SFM60691.1
Luciferase family oxidoreductase, group 1.
  
  0.487
SFM69134.1
Probable oxidoreductase, LLM family.
  
  0.487
SFN08453.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
  0.487
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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