Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM25048.1 | SFM34105.1 | SAMN05421832_101279 | SAMN05421832_10241 | Phosphate acetyltransferase. | Acyl carrier protein. | 0.740 |
SFM25048.1 | SFM59694.1 | SAMN05421832_101279 | SAMN05421832_10474 | Phosphate acetyltransferase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.836 |
SFM25048.1 | SFN01158.1 | SAMN05421832_101279 | SAMN05421832_11183 | Phosphate acetyltransferase. | Acyl dehydratase. | 0.926 |
SFM25048.1 | SFN27485.1 | SAMN05421832_101279 | SAMN05421832_1312 | Phosphate acetyltransferase. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.728 |
SFM25048.1 | acpP | SAMN05421832_101279 | SAMN05421832_102345 | Phosphate acetyltransferase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.794 |
SFM28423.1 | SFM59694.1 | SAMN05421832_101468 | SAMN05421832_10474 | Hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.734 |
SFM28423.1 | SFN01158.1 | SAMN05421832_101468 | SAMN05421832_11183 | Hypothetical protein. | Acyl dehydratase. | 0.913 |
SFM34105.1 | SFM25048.1 | SAMN05421832_10241 | SAMN05421832_101279 | Acyl carrier protein. | Phosphate acetyltransferase. | 0.740 |
SFM34105.1 | SFM35528.1 | SAMN05421832_10241 | SAMN05421832_102112 | Acyl carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.969 |
SFM34105.1 | SFM40384.1 | SAMN05421832_10241 | SAMN05421832_102342 | Acyl carrier protein. | [acyl-carrier-protein] S-malonyltransferase. | 0.988 |
SFM34105.1 | SFM59694.1 | SAMN05421832_10241 | SAMN05421832_10474 | Acyl carrier protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.487 |
SFM34105.1 | SFN01158.1 | SAMN05421832_10241 | SAMN05421832_11183 | Acyl carrier protein. | Acyl dehydratase. | 0.904 |
SFM35528.1 | SFM34105.1 | SAMN05421832_102112 | SAMN05421832_10241 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl carrier protein. | 0.969 |
SFM35528.1 | SFM40384.1 | SAMN05421832_102112 | SAMN05421832_102342 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | [acyl-carrier-protein] S-malonyltransferase. | 0.999 |
SFM35528.1 | SFM59694.1 | SAMN05421832_102112 | SAMN05421832_10474 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-hydroxyacyl-CoA dehydrogenase. | 0.703 |
SFM35528.1 | SFN01158.1 | SAMN05421832_102112 | SAMN05421832_11183 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl dehydratase. | 0.932 |
SFM35528.1 | SFN27485.1 | SAMN05421832_102112 | SAMN05421832_1312 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.650 |
SFM35528.1 | acpP | SAMN05421832_102112 | SAMN05421832_102345 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.984 |
SFM40384.1 | SFM34105.1 | SAMN05421832_102342 | SAMN05421832_10241 | [acyl-carrier-protein] S-malonyltransferase. | Acyl carrier protein. | 0.988 |
SFM40384.1 | SFM35528.1 | SAMN05421832_102342 | SAMN05421832_102112 | [acyl-carrier-protein] S-malonyltransferase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
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