STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN09378.1Protein of unknown function. (119 aa)    
Predicted Functional Partners:
SFM41365.1
Flagellar motor switch protein FliN/FliY.
   
 
 0.910
SFM24333.1
Protein of unknown function.
  
 0.877
SFM35940.1
Parallel beta-helix repeat (two copies).
  
 0.877
SFM40784.1
Hypothetical protein.
  
 0.877
SFM48180.1
Excalibur calcium-binding domain-containing protein.
  
 0.877
SFM70153.1
Protein of unknown function.
  
 0.877
SFM82172.1
Hypothetical protein.
  
 0.877
SFM89591.1
Copper amine oxidase N-terminal domain-containing protein.
  
 0.877
SFN00529.1
Hypothetical protein.
  
 0.877
SFN17840.1
Morphogenetic protein associated with SpoVID.
  
 0.877
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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