STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN18673.1Signal transduction histidine kinase. (348 aa)    
Predicted Functional Partners:
SFN18689.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.974
SFN18640.1
Putative ABC transport system permease protein.
 
     0.947
SFN18655.1
Putative ABC transport system ATP-binding protein.
 
     0.940
SFM20720.1
Signal transduction histidine kinase.
  
 0.936
SFM20758.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.921
SFN22709.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.891
SFM21586.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.888
SFM80700.1
Two-component system, OmpR family, bacitracin resistance response regulator BceR.
  0.885
SFN08159.1
Putative ABC transport system permease protein.
 
 
 0.854
SFM37697.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
    
  0.849
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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