STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN22302.1Single cache domain 3-containing protein. (439 aa)    
Predicted Functional Partners:
SFM96285.1
Two-component system, CitB family, response regulator.
 
 0.984
SFM28226.1
Hypothetical protein.
  
 0.844
SFM76657.1
Hypothetical protein.
  
 0.844
SFM20720.1
Signal transduction histidine kinase.
     
 0.830
SFM96265.1
Two-component system, CitB family, sensor kinase.
  
  
  0.830
SFM27405.1
His Kinase A (phospho-acceptor) domain-containing protein.
     
 0.790
SFM37044.1
Two-component system, chemotaxis family, response regulator CheV.
     
 0.713
SFM27961.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.711
SFM98327.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
     
 0.674
SFM96305.1
Putative tricarboxylic transport membrane protein.
 
    0.664
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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