STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN22738.1Putative ABC transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SFN22766.1
Putative ABC transport system permease protein.
 0.986
SFM27736.1
Putative ABC transport system permease protein.
  0.982
SFN08159.1
Putative ABC transport system permease protein.
 0.954
SFN18640.1
Putative ABC transport system permease protein.
 0.938
SFM21625.1
Putative ABC transport system permease protein.
 0.934
SFM80634.1
Bacitracin transport system permease protein.
 0.922
SFM26877.1
HlyD family secretion protein.
  
 0.918
SFM92587.1
Nickel transport system ATP-binding protein.
 
  
 
0.914
SFN21880.1
Cystine transport system permease protein.
 
   
  0.911
SFN22722.1
Signal transduction histidine kinase.
 
     0.879
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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