STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN22796.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SFN23565.1
Mu transposase, C-terminal.
   
 
 0.649
SFM27761.1
Protein of unknown function.
   
 
 0.483
SFN09378.1
Protein of unknown function.
   
 
 0.483
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.472
SFN09357.1
Protein of unknown function.
  
 
 0.472
SFN14066.1
Phage tail tape measure protein, TP901 family, core region.
  
 
 0.472
SFN22766.1
Putative ABC transport system permease protein.
       0.452
SFN22738.1
Putative ABC transport system ATP-binding protein.
  
    0.451
SFN22779.1
Hypothetical protein.
       0.449
SFN22812.1
Catechol 2,3-dioxygenase.
       0.429
Your Current Organism:
Psychrobacillus psychrodurans
NCBI taxonomy Id: 126157
Other names: ATCC BAA-796, Bacillus psychrodurans, Bacillus psychrodurans Abd El-Rahman et al. 2002, CIP 107791, DSM 11713, NCIMB 13837, P. psychrodurans, Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 68E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.