STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLR57623.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2567 aa)    
Predicted Functional Partners:
OLR57620.1
Septation protein spoVG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SpoVG family.
 
     0.920
OLR57783.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
OLR57641.1
Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
OLR57634.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
OLR57622.1
Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.781
BIV20_10350
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
OLR57784.1
Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
OLR57631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
OLR57621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
OLR57625.1
DpnD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
Your Current Organism:
Roseburia sp. 499
NCBI taxonomy Id: 1261634
Other names: R. sp. 499
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.