STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLR38914.1Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
OLR38320.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.889
OLR38915.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OLR38968.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
     0.582
OLR39936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.519
OLR39928.1
NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.507
pyrK
Dihydroorotate dehydrogenase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
  0.507
OLR39254.1
Rubrerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.471
Your Current Organism:
Roseburia sp. 831b
NCBI taxonomy Id: 1261635
Other names: R. sp. 831b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.