STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F503_00023Mfs general substrate transporter. (510 aa)    
Predicted Functional Partners:
F503_02973
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.574
F503_08574
Cytochrome b5; Belongs to the cytochrome b5 family.
     
 0.483
F503_06862
Caib baif family enzyme.
    
  0.451
F503_04448
Dna-directed rna polymerases ii 24 kDa polypeptide.
    
  0.434
F503_05871
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.434
F503_00896
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.434
F503_08056
Rna polymerase ii subunit 3.
    
  0.428
F503_06986
Rna polymerase rpb4 family protein.
    
  0.423
Your Current Organism:
Ophiostoma piceae
NCBI taxonomy Id: 1262450
Other names: O. piceae UAMH 11346, Ophiostoma piceae UAMH 11346, Ophiostoma piceae UAMH-11346
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.