STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCX53005.1Putative aminopeptidase; Product inferred by homology to UniProt; Belongs to the peptidase C1 family. (464 aa)    
Predicted Functional Partners:
CCX53003.1
aBC transporter iron chelate uptake transporter (FeCT) family ATP-binding protein; Product inferred by homology to UniProt.
       0.548
CCX53004.1
Iron chelate uptake ABC transporter FeCT family permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.548
Your Current Organism:
Alistipes sp. CAG514
NCBI taxonomy Id: 1262696
Other names: A. sp. CAG:514, Alistipes sp. CAG:514
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