Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CDB53038.1 | CDB53603.1 | BN554_01370 | BN554_00230 | n-acetylmuramoyl-L-alanine amidase; Product inferred by homology to UniProt. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.890 |
| CDB53283.1 | CDB53603.1 | BN554_01615 | BN554_00230 | Inactivated superfamily I helicase; Product inferred by homology to UniProt. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.765 |
| CDB53283.1 | CDB53829.1 | BN554_01615 | BN554_00419 | Inactivated superfamily I helicase; Product inferred by homology to UniProt. | Multi-sensor hybrid histidine kinase; Product inferred by homology to UniProt. | 0.493 |
| CDB53283.1 | CDB54005.1 | BN554_01615 | BN554_00592 | Inactivated superfamily I helicase; Product inferred by homology to UniProt. | smpA/OmlA; Product inferred by homology to UniProt. | 0.720 |
| CDB53283.1 | CDB54284.1 | BN554_01615 | BN554_00865 | Inactivated superfamily I helicase; Product inferred by homology to UniProt. | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.472 |
| CDB53283.1 | lptD | BN554_01615 | BN554_01604 | Inactivated superfamily I helicase; Product inferred by homology to UniProt. | Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.648 |
| CDB53603.1 | CDB53038.1 | BN554_00230 | BN554_01370 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | n-acetylmuramoyl-L-alanine amidase; Product inferred by homology to UniProt. | 0.890 |
| CDB53603.1 | CDB53283.1 | BN554_00230 | BN554_01615 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Inactivated superfamily I helicase; Product inferred by homology to UniProt. | 0.765 |
| CDB53603.1 | CDB53604.1 | BN554_00230 | BN554_00231 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Endonuclease/exonuclease/phosphatase; Product inferred by homology to UniProt. | 0.833 |
| CDB53603.1 | CDB53617.1 | BN554_00230 | BN554_00244 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | aBC-type transport system permease component; Product inferred by homology to UniProt. | 0.956 |
| CDB53603.1 | CDB53829.1 | BN554_00230 | BN554_00419 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Multi-sensor hybrid histidine kinase; Product inferred by homology to UniProt. | 0.667 |
| CDB53603.1 | CDB54005.1 | BN554_00230 | BN554_00592 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | smpA/OmlA; Product inferred by homology to UniProt. | 0.636 |
| CDB53603.1 | CDB54284.1 | BN554_00230 | BN554_00865 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.730 |
| CDB53603.1 | lolD | BN554_00230 | BN554_00243 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative atp-binding abc transporter protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.898 |
| CDB53603.1 | lptD | BN554_00230 | BN554_01604 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.733 |
| CDB53603.1 | macB | BN554_00230 | BN554_00588 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | aBC transporter related; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.898 |
| CDB53604.1 | CDB53603.1 | BN554_00231 | BN554_00230 | Endonuclease/exonuclease/phosphatase; Product inferred by homology to UniProt. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.833 |
| CDB53617.1 | CDB53603.1 | BN554_00244 | BN554_00230 | aBC-type transport system permease component; Product inferred by homology to UniProt. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.956 |
| CDB53617.1 | CDB53829.1 | BN554_00244 | BN554_00419 | aBC-type transport system permease component; Product inferred by homology to UniProt. | Multi-sensor hybrid histidine kinase; Product inferred by homology to UniProt. | 0.658 |
| CDB53617.1 | CDB54284.1 | BN554_00244 | BN554_00865 | aBC-type transport system permease component; Product inferred by homology to UniProt. | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.600 |
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