STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE09362.1Radical SAM domain protein; Product inferred by homology to UniProt. (269 aa)    
Predicted Functional Partners:
CDE07686.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.856
CDE08985.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
    
  0.854
CDE09047.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
  0.779
CDE09154.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 
  0.655
CDE07467.1
(P)ppGpp synthetase I SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
  0.633
CDE07690.1
Anaerobic ribonucleoside-triphosphate reductase large subunit; Product inferred by homology to UniProt.
    
  0.626
CDE08158.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
    
  0.621
CDE09363.1
Unknown; No significant homology to UniProt.
       0.553
CDE08272.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
  
  
 0.519
CDE09361.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.515
Your Current Organism:
Bacillus sp. CAG988
NCBI taxonomy Id: 1262708
Other names: B. sp. CAG:988, Bacillus sp. CAG:988
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.