STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE07463.1Stage V sporulation protein B; Product inferred by homology to UniProt. (429 aa)    
Predicted Functional Partners:
CDE09369.1
Putative lipoprotein; Product inferred by homology to UniProt.
 
     0.731
CDE07530.1
cotE protein; Product inferred by homology to UniProt.
  
  
 0.694
CDE08935.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
 0.693
CDE08726.1
Stage V sporulation protein D; Product inferred by homology to UniProt.
 
  
 0.670
CDE08492.1
Stage II sporulation protein P; Product inferred by homology to UniProt.
  
   
 0.629
CDE08104.1
Lipoprotein LpqB GerMN domain; Product inferred by homology to UniProt.
  
     0.626
CDE07396.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.592
CDE08070.1
Uncharacterized conserved secreted protein; Product inferred by homology to UniProt.
  
     0.579
CDE07852.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.571
CDE07820.1
Stage IV sporulation protein A (Spore cortex formation and coat assembly); Product inferred by homology to UniProt.
  
  
 0.559
Your Current Organism:
Bacillus sp. CAG988
NCBI taxonomy Id: 1262708
Other names: B. sp. CAG:988, Bacillus sp. CAG:988
Server load: low (24%) [HD]