STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCX56008.1cDP-diacylglycerol/serine O-phosphatidyltransferase; Product inferred by homology to UniProt; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (240 aa)    
Predicted Functional Partners:
CCX55245.1
Phosphatidylserine decarboxylase proenzyme; Product inferred by homology to UniProt.
 
 
 0.991
CCX55246.1
Phosphatidate cytidylyltransferase; Product inferred by homology to UniProt.
    
 0.909
CCX56002.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.773
CCX56004.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.773
CCX56006.1
Unknown; No significant homology to UniProt.
       0.773
CCX56010.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the peptidase C1 family.
       0.773
CCX54922.1
Homoserine O-acetyltransferase; Product inferred by homology to UniProt.
  
  
  0.563
CCX56011.1
Glyceraldehyde-3-phosphate dehydrogenase type I; Product inferred by homology to UniProt; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.550
CCX55165.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.496
CCX57217.1
Methyltransferase type 12; Product inferred by homology to UniProt.
     
 0.473
Your Current Organism:
Bacteroides sp. CAG1060
NCBI taxonomy Id: 1262734
Other names: B. sp. CAG:1060, Bacteroides sp. CAG:1060
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