STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD84230.1Thioredoxin; Product inferred by homology to UniProt. (361 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.984
CDD84229.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.727
CDD84227.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.698
CDD84208.1
Protein containing RagB/SusD domain protein; Product inferred by homology to UniProt.
 
     0.571
CDD84206.1
tonB-dependent receptor plug; Product inferred by homology to UniProt.
 
     0.516
CDD81896.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.474
CDD82841.1
tonB-dependent receptor plug; Product inferred by homology to UniProt.
  
     0.471
CDD83352.1
Thioredoxin family protein; Product inferred by homology to UniProt.
  
   0.456
CDD83336.1
tonB-dependent receptor plug; Product inferred by homology to UniProt.
  
     0.454
CDD81945.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.453
Your Current Organism:
Bacteroides sp. CAG462
NCBI taxonomy Id: 1262740
Other names: B. sp. CAG:462, Bacteroides sp. CAG:462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.