STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA96853.1L-serine dehydratase iron-sulfur-dependent single chain form; Product inferred by homology to UniProt; Belongs to the iron-sulfur dependent L-serine dehydratase family. (403 aa)    
Predicted Functional Partners:
CDA92907.1
Fumarate hydratase class I anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.805
CDA96633.1
Aspartate kinase; Product inferred by homology to UniProt.
  
 
 0.799
CDA96851.1
Glyceraldehyde-3-phosphate dehydrogenase type I; Product inferred by homology to UniProt; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
  0.786
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.756
CDA96852.1
Phenylalanine and histidine ammonia-lyase; Product inferred by homology to UniProt.
     
 0.750
CDA94494.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
   
 
 0.674
CDA94481.1
Cysteate synthase; Product inferred by homology to UniProt.
   
 
 0.670
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.665
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.662
CDA96033.1
Aspartate aminotransferase; Product inferred by homology to UniProt.
    
 0.651
Your Current Organism:
Bacteroides sp. CAG709
NCBI taxonomy Id: 1262748
Other names: B. sp. CAG:709, Bacteroides sp. CAG:709
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