STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCX47393.1Probable glutamate/gamma-aminobutyrate antiporter; Product inferred by homology to UniProt. (526 aa)    
Predicted Functional Partners:
CCX47392.1
Arabinose efflux permease; Product inferred by homology to UniProt.
 
     0.869
CCX47338.1
Alpha-amylase (1 4-alpha-D-glucanglucanohydrolase); Product inferred by homology to UniProt.
   
 0.774
CCX47627.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 0.774
CCX48559.1
Alpha amylase catalytic region; Product inferred by homology to UniProt.
   
 0.774
CCX47394.1
Phosphatidylserine decarboxylase-related protein; Product inferred by homology to UniProt; Belongs to the phosphatidylserine decarboxylase family.
 
     0.642
nadE
nAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.606
CCX48173.1
Shikimate 5-dehydrogenase; Product inferred by homology to UniProt.
   
 0.558
CCX47078.1
Glutaminase 1; Product inferred by homology to UniProt; Belongs to the glutaminase family.
 
  
 0.515
CCX49208.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.496
CCX48626.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
    0.492
Your Current Organism:
Bacteroides sp. CAG927
NCBI taxonomy Id: 1262753
Other names: B. sp. CAG:927, Bacteroides sp. CAG:927
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