STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY24724.1Ribokinase; Product inferred by homology to UniProt. (347 aa)    
Predicted Functional Partners:
CCY23498.1
Putative glycogen debranching enzyme archaeal type; Product inferred by homology to UniProt.
   
 0.851
CCY23547.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Product inferred by homology to UniProt; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.801
CCY24237.1
Fructose-1 6-bisphosphate aldolase class II; Product inferred by homology to UniProt.
 
 
 0.727
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.686
CCY24891.1
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; Product inferred by homology to UniProt; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.685
CCY24613.1
kdgA1 protein; Product inferred by homology to UniProt.
 
 
 0.683
CCY24261.1
Aldehyde-alcohol dehydrogenase; Product inferred by homology to UniProt; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.682
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
 0.657
ribBA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.631
CCY24216.1
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.
   
 0.611
Your Current Organism:
Brachyspira sp. CAG484
NCBI taxonomy Id: 1262759
Other names: B. sp. CAG:484, Brachyspira sp. CAG:484
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