STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldh-2L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (312 aa)    
Predicted Functional Partners:
CCY77390.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
  
 0.962
CCY76596.1
Pyruvate ferredoxin oxireductase; Product inferred by homology to UniProt.
  
 
 0.945
CCY75631.1
Citrate synthase; Product inferred by homology to UniProt; Belongs to the citrate synthase family.
  
 0.924
CCY76593.1
Glutamate synthase large subunit; Product inferred by homology to UniProt.
  
 
 0.914
CCY76594.1
Glutamate synthase (NADPH) large subunit; Product inferred by homology to UniProt.
  
 
 0.914
CCY76595.1
Pyruvate oxireductase; Product inferred by homology to UniProt.
  
 
 0.872
CCY75630.1
Isocitrate dehydrogenase [NADP]; Product inferred by homology to UniProt.
  
 
 0.847
pgi
Glucose-6-phosphate isomerase; Product inferred by homology to UniProt; Belongs to the GPI family.
  
 
 0.830
CCY74666.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Product inferred by homology to UniProt.
  
 
 0.786
CCY74726.1
nADH dehydrogenase (Quinone); Product inferred by homology to UniProt.
  
 
 0.783
Your Current Organism:
Brachyspira sp. CAG700
NCBI taxonomy Id: 1262760
Other names: B. sp. CAG:700, Brachyspira sp. CAG:700
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