STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY77274.1Site-determining protein; Product inferred by homology to UniProt. (289 aa)    
Predicted Functional Partners:
CCY77275.1
Flagellar biosynthesis regulator FlhF; Product inferred by homology to UniProt.
 
 
 0.994
CCY77277.1
Type III secretion FHIPEP protein; Product inferred by homology to UniProt.
  
  
 0.828
CCY77271.1
Polymerase; Product inferred by homology to UniProt.
 
   
 0.811
CCY74866.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.799
CCY77273.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.775
flhB
Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
 
 0.771
CCY74865.1
Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.765
CCY77280.1
Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
  
  
 0.765
CCY77272.1
rNA polymerase sigma factor; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family.
  
  
 0.760
CCY76798.1
Flagellar switch complex protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.740
Your Current Organism:
Brachyspira sp. CAG700
NCBI taxonomy Id: 1262760
Other names: B. sp. CAG:700, Brachyspira sp. CAG:700
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