STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC36313.1Small-conductance mechanosensitive channel; Product inferred by homology to UniProt. (286 aa)    
Predicted Functional Partners:
CDC36312.1
Hypothetical cytosolic protein; Product inferred by homology to UniProt.
 
     0.804
glgB-2
1 4-alpha-glucan branching enzyme GlgB 2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.773
CDC36315.1
hTH domain of SpoOJ/ParA/ParB/RepB family protein; Product inferred by homology to UniProt.
       0.701
CDC40131.1
K+-dependent Na+/Ca+ exchanger-like protein; Product inferred by homology to UniProt.
 
     0.530
CDC36316.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Product inferred by homology to UniProt; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.522
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.418
Your Current Organism:
Butyrivibrio sp. CAG318
NCBI taxonomy Id: 1262761
Other names: B. sp. CAG:318, Butyrivibrio sp. CAG:318
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