Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CDE27648.1 | CDE27789.1 | BN591_01895 | BN591_00253 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Uncharacterized protein; Product inferred by homology to UniProt. | 0.443 |
| CDE27648.1 | CDE27912.1 | BN591_01895 | BN591_00335 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Transcriptional regulator Spx; Product inferred by homology to UniProt; Belongs to the ArsC family. | 0.881 |
| CDE27648.1 | CDE28124.1 | BN591_01895 | BN591_00030 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | divIVA domain protein; Product inferred by homology to UniProt. | 0.589 |
| CDE27648.1 | CDE28680.1 | BN591_01895 | BN591_01025 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Replication initiation and membrane attachment protein DnaB/DnaD family; Product inferred by homology to UniProt. | 0.570 |
| CDE27648.1 | recU | BN591_01895 | BN591_00060 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.454 |
| CDE27648.1 | rpoA | BN591_01895 | BN591_00934 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | dNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.787 |
| CDE27648.1 | rpoB | BN591_01895 | BN591_01136 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | dNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.776 |
| CDE27648.1 | rpoC | BN591_01895 | BN591_01135 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | dNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.896 |
| CDE27648.1 | sigA | BN591_01895 | BN591_00509 | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | rNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.817 |
| CDE27751.1 | CDE27789.1 | BN591_00215 | BN591_00253 | comG operon protein 3; Product inferred by homology to UniProt. | Uncharacterized protein; Product inferred by homology to UniProt. | 0.682 |
| CDE27751.1 | CDE27912.1 | BN591_00215 | BN591_00335 | comG operon protein 3; Product inferred by homology to UniProt. | Transcriptional regulator Spx; Product inferred by homology to UniProt; Belongs to the ArsC family. | 0.715 |
| CDE27751.1 | CDE28124.1 | BN591_00215 | BN591_00030 | comG operon protein 3; Product inferred by homology to UniProt. | divIVA domain protein; Product inferred by homology to UniProt. | 0.651 |
| CDE27751.1 | CDE28680.1 | BN591_00215 | BN591_01025 | comG operon protein 3; Product inferred by homology to UniProt. | Replication initiation and membrane attachment protein DnaB/DnaD family; Product inferred by homology to UniProt. | 0.639 |
| CDE27751.1 | recU | BN591_00215 | BN591_00060 | comG operon protein 3; Product inferred by homology to UniProt. | Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.654 |
| CDE27789.1 | CDE27648.1 | BN591_00253 | BN591_01895 | Uncharacterized protein; Product inferred by homology to UniProt. | Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.443 |
| CDE27789.1 | CDE27751.1 | BN591_00253 | BN591_00215 | Uncharacterized protein; Product inferred by homology to UniProt. | comG operon protein 3; Product inferred by homology to UniProt. | 0.682 |
| CDE27789.1 | CDE27912.1 | BN591_00253 | BN591_00335 | Uncharacterized protein; Product inferred by homology to UniProt. | Transcriptional regulator Spx; Product inferred by homology to UniProt; Belongs to the ArsC family. | 0.673 |
| CDE27789.1 | CDE28124.1 | BN591_00253 | BN591_00030 | Uncharacterized protein; Product inferred by homology to UniProt. | divIVA domain protein; Product inferred by homology to UniProt. | 0.698 |
| CDE27789.1 | CDE28680.1 | BN591_00253 | BN591_01025 | Uncharacterized protein; Product inferred by homology to UniProt. | Replication initiation and membrane attachment protein DnaB/DnaD family; Product inferred by homology to UniProt. | 0.761 |
| CDE27789.1 | recU | BN591_00253 | BN591_00060 | Uncharacterized protein; Product inferred by homology to UniProt. | Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.771 |
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