STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE28148.1Uncharacterized protein; Product inferred by homology to UniProt. (154 aa)    
Predicted Functional Partners:
CDE28438.1
Transglycosylase; Product inferred by homology to UniProt.
   
 
 0.920
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.892
CDE28171.1
Serine/threonine-protein kinase PrkC; Product inferred by homology to UniProt.
  
 
 0.811
CDE28147.1
S4 domain protein; Product inferred by homology to UniProt.
  
  
 0.776
CDE28887.1
Pyridoxal phosphate enzyme YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.689
CDE29004.1
Putative septation ring formation regulator EzrA; Product inferred by homology to UniProt.
   
 
 0.609
CDE27717.1
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.598
CDE28144.1
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
    0.574
CDE28145.1
hDIG domain protein; Product inferred by homology to UniProt.
  
    0.552
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
     
 0.547
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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