STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE28408.1pTS system Lactose/Cellobiose specific IIB subunit; Product inferred by homology to UniProt. (466 aa)    
Predicted Functional Partners:
CDE27919.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 0.994
CDE28780.1
pTS system sucrose-specific IIBC component; Product inferred by homology to UniProt.
  
 0.994
CDE29053.1
pTS system glucose-like IIB component; Product inferred by homology to UniProt.
  
 0.994
CDE27143.1
pTS system N-acetylglucosamine-specific IIBC component; Product inferred by homology to UniProt.
  
 0.976
CDE29075.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Product inferred by homology to UniProt.
  
 
 0.909
CDE27049.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Product inferred by homology to UniProt.
  
 
 0.909
CDE28232.1
Bacterial group 3 Ig-like protein; Product inferred by homology to UniProt.
  
  
 0.813
CDE28967.1
4-alpha-glucanotransferase; Product inferred by homology to UniProt.
   
 0.752
CDE28737.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.706
CDE29007.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
  
  0.701
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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