Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CDE26895.1 | CDE27968.1 | BN591_00012 | BN591_00384 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | 0.960 |
| CDE26895.1 | CDE28237.1 | BN591_00012 | BN591_00625 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.956 |
| CDE26895.1 | CDE28238.1 | BN591_00012 | BN591_00626 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.956 |
| CDE26895.1 | CDE28419.1 | BN591_00012 | BN591_00805 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Transcriptional regulator AsnC family; Product inferred by homology to UniProt. | 0.937 |
| CDE26895.1 | CDE28420.1 | BN591_00012 | BN591_00806 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Aminotransferase class I/II; Product inferred by homology to UniProt. | 0.949 |
| CDE26895.1 | CDE28644.1 | BN591_00012 | BN591_00989 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt. | 0.999 |
| CDE26895.1 | CDE28665.1 | BN591_00012 | BN591_01010 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt. | 0.974 |
| CDE26895.1 | CDE28677.1 | BN591_00012 | BN591_01022 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family. | 0.999 |
| CDE26895.1 | CDE28692.1 | BN591_00012 | BN591_01037 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | Prephenate dehydratase; Product inferred by homology to UniProt. | 0.915 |
| CDE26895.1 | CDE29072.1 | BN591_00012 | BN591_01392 | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | nADH oxidase; Product inferred by homology to UniProt. | 0.974 |
| CDE27968.1 | CDE26895.1 | BN591_00384 | BN591_00012 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | 0.960 |
| CDE27968.1 | CDE28237.1 | BN591_00384 | BN591_00625 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.938 |
| CDE27968.1 | CDE28238.1 | BN591_00384 | BN591_00626 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.938 |
| CDE27968.1 | CDE28420.1 | BN591_00384 | BN591_00806 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | Aminotransferase class I/II; Product inferred by homology to UniProt. | 0.820 |
| CDE27968.1 | CDE28644.1 | BN591_00384 | BN591_00989 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt. | 0.796 |
| CDE27968.1 | CDE28665.1 | BN591_00384 | BN591_01010 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt. | 0.852 |
| CDE27968.1 | CDE29072.1 | BN591_00384 | BN591_01392 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | nADH oxidase; Product inferred by homology to UniProt. | 0.852 |
| CDE28237.1 | CDE26895.1 | BN591_00625 | BN591_00012 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt. | 0.956 |
| CDE28237.1 | CDE27968.1 | BN591_00625 | BN591_00384 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt. | 0.938 |
| CDE28237.1 | CDE28238.1 | BN591_00625 | BN591_00626 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.914 |
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