STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE28517.1Periplasmic binding protein; Product inferred by homology to UniProt. (330 aa)    
Predicted Functional Partners:
CDE28518.1
fAD binding domain in molybdopterin dehydrogenase; Product inferred by homology to UniProt.
 
     0.795
CDE28520.1
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding domain protein; Product inferred by homology to UniProt.
 
     0.790
CDE28521.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.752
CDE28519.1
2Fe-2S iron-sulfur cluster-binding domain protein; Product inferred by homology to UniProt.
       0.749
hisI
phosphoribosyl-ATP diphosphatase; Product inferred by homology to UniProt; In the N-terminal section; belongs to the PRA-CH family.
   
   0.660
CDE28508.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.653
CDE28157.1
Receptor family ligand-binding protein; Product inferred by homology to UniProt.
  
 
 0.640
CDE28777.1
Transcriptional regulator AraC family; Product inferred by homology to UniProt.
  
 0.588
CDE28340.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.555
CDE28410.1
Efflux ABC transporter permease protein; Product inferred by homology to UniProt.
  
 
 0.555
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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